• Fiber Navigator (november 2015 Download For Mac



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    Real-time fiber tractography (Chamberland et al. 2014, Frontiers in Neuroinformatics). Orientation-dependent opacity rendering (Tax et al. 2015, PLoS ONE). Display of MRI & functional MRI.

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    • Improved Tabbed Browsing
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    • Session Restore
    • Web Feeds (RSS)
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    2015
    Updates : Firefox for Mac Updates

    The Fibernavigator is a tool designed for a fast and versatile visualization of streamline datasets.

    Welcome new users

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    You can find a pre-built executable and all the latest tools here: https://github.com/chamberm/fibernavigator/releases.

    Acknowledgements

    If you use the Fibernavigator, please make sure that you quote the following references in any publications:

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    Chamberland M., Whittinstall K., Fortin D., Mathieu D., and Descoteaux M., 'Real-time multi-peak tractography for instantaneous connectivity display.' Frontiers in Neuroinformatics, 8 (59): 1-15, 2014.

    Chamberland M., Bernier M., Fortin D., Whittinstall K., and Descoteaux M., '3D interactive tractography-informed resting-state fMRI connectivity', Frontiers in Neuroscience (Brain Imaging Methods) 9:275, 2015

    Tutorials

    NEW: Updated live demo on how-to use the tractography tools: https://youtu.be/A3KCekqPTok

    Some tutorials here: Tutorial Page.

    Video tutorials of the Fibernavigator are available.

    • Optic radiation : Real-time tractography of the optic radiation using HCP data
    • Scene navigation: how to interact with the 3D view, move planes, etc.
    • Mesh display and interaction: how to create and modify the display of meshes.
    • Drawing tool: how to draw on empty or already existing anatomies.
    • Fiber navigation: how to interact with fibers and select a subset of them.
    • Opacity rendering: how to generate orientation-dependent opacity rendering.
    • Tractography-driven resting-state fMRI: how to combine dMRI with fMRI.

    A list of all tutorials can be seen on the Tutorial Page page.

    Highlights:

    • Fast and efficient visualization of the results of deterministic and probabilistic tractograms.
    • Interactive selection of fibers.
    • Real-time fiber tractography (Chamberland et al. 2014, Frontiers in Neuroinformatics).
    • Orientation-dependent opacity rendering (Tax et al. 2015, PLoS ONE).
    • Display of MRI & functional MRI. Image Gallery

    How to get the application

    • Build instructions for Ubuntu and other Linux distributions are provided
    • Visit the wiki for MAC building
    • Windows builds are available on the Releases page.

    Development and contact with the team

    • Issues can be submitted in the issue tracker.
    • Various development and use recommandations and how-to are located on the wiki.

    A note for previous users

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    This is the new source for the code and documentation of the original Fibernavigator.

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    All issues have been moved to the new issue tracker. New issues will also be tracked here.